The detailed information of tRNA gene sequence


Sequence ID>WENV170651125
Genome IDJRYF01001083
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 102352
End posion on genome 102428
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agtttgcaca
tRNA gene sequence 
GGTCCCGTAGCTCAGTTGGATAGAGCGTCCGCCTCCTAAGCGGAAGGCCGCTGGTTCGAA
TCCAGCCGGGACCACCA
Downstream region at tRNA end position 
ttctggccca
Secondary structure (Cloverleaf model)
>WENV170651125	Arg	CCT
                   a      ACCA ttctggccca
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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