The detailed information of tRNA gene sequence


Sequence ID>WENV170651133
Genome IDJRYF01001128
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 48335
End posion on genome 48264
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cccggccttt
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCACCAGCCTTCCAAGCTGGACGTTGCGCGTTCGAGTC
GCGTCGCCCGCTgtc
Downstream region at tRNA end position 
atgttcggtg
Secondary structure (Cloverleaf model)
>WENV170651133	Gly	TCC
                   t      Tgtc atgttcggtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T G C G C     A
        A A        A      + | | | |     G
      T     C T C G       G C G C G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     ACGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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