The detailed information of tRNA gene sequence


Sequence ID>WENV170651134
Genome IDJRYF01001128
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 33662
End posion on genome 33579
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cccgaacttc
tRNA gene sequence 
GCGGCCGTGGCGGAATTGGCAGACGCGCTAGGTTCAGGTCCTAGTGATCGCAAGATCGTG
GAGGTTCGACTCCTCTCGGCCGCAttt
Downstream region at tRNA end position 
ccgttctttc
Secondary structure (Cloverleaf model)
>WENV170651134	Leu	CAG
                   c      Attt ccgttctttc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGATCGCAAGATCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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