The detailed information of tRNA gene sequence


Sequence ID>WENV170651137
Genome IDJRYF01001140
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 19069
End posion on genome 19160
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaggacatct
tRNA gene sequence 
GGTGAGGTGGGTGAGTGGCTGAAACCACCGGTTTGCTAAACCGGCGTACTCTGAAAGGGG
TATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
ctttgtaaag
Secondary structure (Cloverleaf model)
>WENV170651137	Ser	GCT
                   t      GCCA ctttgtaaag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCTGAAAGGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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