The detailed information of tRNA gene sequence


Sequence ID>WENV170651138
Genome IDJRYF01001140
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 19197
End posion on genome 19274
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaagtggatt
tRNA gene sequence 
CGGGGCATAGCGCAGTCCGGTTAGCGTACCTGCTTTGGGAGCAGGGGGTCGCAGGTTCGA
ATCCTGCTGCCCCGACAA
Downstream region at tRNA end position 
ttacatgaaa
Secondary structure (Cloverleaf model)
>WENV170651138	Pro	TGG
                   t      ACAA ttacatgaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     G
  C         C G C G       G C A G G     C
  G         | | | +                 T T
  G         G C G T
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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