The detailed information of tRNA gene sequence


Sequence ID>WENV170651139
Genome IDJRYF01001152
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2339
End posion on genome 2264
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgcggtccgc
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCGGCGGTTCGAGA
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
gcggtccggg
Secondary structure (Cloverleaf model)
>WENV170651139	Val	TAC
                   c      ACCA gcggtccggg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          A G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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