The detailed information of tRNA gene sequence


Sequence ID>WENV170651141
Genome IDJRYF01001156
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2229
End posion on genome 2154
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggaaggcagc
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCGGCGGTTCGAGA
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
aatcaaagcg
Secondary structure (Cloverleaf model)
>WENV170651141	Val	TAC
                   c      ACCA aatcaaagcg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          A G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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