The detailed information of tRNA gene sequence


Sequence ID>WENV170651154
Genome IDJRYF01001325
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4369
End posion on genome 4294
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnncgc
tRNA gene sequence 
AGGGGCATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
gccgctgaag
Secondary structure (Cloverleaf model)
>WENV170651154	Trp	CCA
                   c      GCCA gccgctgaag
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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