The detailed information of tRNA gene sequence


Sequence ID>WENV170651157
Genome IDJRYF01001442
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3213
End posion on genome 3286
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agcacgtcaa
tRNA gene sequence 
GCCCTCATAGCTCAGTCGGCAGAGCACACCCTTGGTAAGGGTGAGGTCATGGGTTCGAAT
CTCATTGAGGGCTCag
Downstream region at tRNA end position 
ttgctgaaaa
Secondary structure (Cloverleaf model)
>WENV170651157	Thr	GGT
                   a      TCag ttgctgaaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T A C T C     A
      T G A        A      | | | + |     G
    C       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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