The detailed information of tRNA gene sequence


Sequence ID>WENV170651159
Genome IDJRYF01001556
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 101579
End posion on genome 101504
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cactcagttt
tRNA gene sequence 
AGGGGTATGGTGTCAATGGTTAGCATGGAGGTCTCCAAAACCTTAGGTGCGGGTTCGAAT
CCTGCTACCCCTGCCA
Downstream region at tRNA end position 
ttttgagaac
Secondary structure (Cloverleaf model)
>WENV170651159	Trp	CCA
                   t      GCCA ttttgagaac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
      A A C        G      | | + | |     G
    T       T G T G       G C G G G     C
    G       + | | +                 T T
    G       G C A T
      T T A        G     AGGT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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