The detailed information of tRNA gene sequence


Sequence ID>WENV170651169
Genome IDJRYF01001745
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4483
End posion on genome 4407
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggctcagt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCCCCCGCAACCA
Downstream region at tRNA end position 
ccgatcagcg
Secondary structure (Cloverleaf model)
>WENV170651169	Met	CAT
                   t      ACCA ccgatcagcg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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