The detailed information of tRNA gene sequence


Sequence ID>WENV170651171
Genome IDJRYF01001780
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1487
End posion on genome 1563
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agagcaattt
tRNA gene sequence 
GCCACCGTGGCTCAGCTGGCTAGAGCAGACGATTCGTAATCGTCAGATCATGGGTTCGAA
TCCCATCGGTGGCTCAA
Downstream region at tRNA end position 
cccaggcaaa
Secondary structure (Cloverleaf model)
>WENV170651171	Thr	CGT
                   t      TCAA cccaggcaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGATC
                    G - C
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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