The detailed information of tRNA gene sequence


Sequence ID>WENV170651174
Genome IDJRYF01001824
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 551
End posion on genome 641
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgtcccgc
tRNA gene sequence 
GGAGGGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGTTAACAGCCC
ACCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gtagattacc
Secondary structure (Cloverleaf model)
>WENV170651174	Ser	GGA
                   c      GCCA gtagattacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGTTAACAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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