The detailed information of tRNA gene sequence


Sequence ID>WENV170651176
Genome IDJRYF01001842
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 438
End posion on genome 351
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gaaacagtac
tRNA gene sequence 
GCATGGGTGGTCGAGCGGTCAAAGGCAACGGGCTGTAAACCCGTCGGGTTAACTCCCTAC
GCAGGTTCGAATCCTGCCCCATGCACCA
Downstream region at tRNA end position 
cgtagatcgt
Secondary structure (Cloverleaf model)
>WENV170651176	Tyr	GTA
                   c      ACCA cgtagatcgt
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       G C T G       G C A G G     C
    G         | + |                 T T
    T       A G G C
      C A A        A     CGGGTTAACTCCCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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