The detailed information of tRNA gene sequence


Sequence ID>WENV170651185
Genome IDJRYF01002016
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 40133
End posion on genome 40044
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcttctcgc
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCAGTCTCGAAAATTGTTGAGCCTTAACGGGTT
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcaaaattcc
Secondary structure (Cloverleaf model)
>WENV170651185	Ser	CGA
                   c      GCCA gcaaaattcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGAGCCTTAACGGGTTCC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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