The detailed information of tRNA gene sequence


Sequence ID>WENV170651191
Genome IDJRYF01002132
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 5615
End posion on genome 5540
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaccgaccgc
tRNA gene sequence 
CGGGGCGTAGCTCAGCCTGGTCTAGAGCGTCTGCATGGGGTGCAGAAGGTCGCTAGTTCG
AATCTAGTCGCCCCGAata
Downstream region at tRNA end position 
aaacttgcta
Secondary structure (Cloverleaf model)
>WENV170651191	Pro	GGG
                   c      Aata aaacttgcta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A T C     A
    C C G A        A      + | | | |     G
  T         C T C G       G C T A G     C
  G         | | | |                 T T
  G         G A G C
    T C T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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