The detailed information of tRNA gene sequence


Sequence ID>WENV170651192
Genome IDJRYF01002145
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3486
End posion on genome 3411
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgagcggac
tRNA gene sequence 
GGGCCGTTAGCTCAGCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTTGGTTCGAAC
CCAACACGGCCTACCG
Downstream region at tRNA end position 
gcgcggcacg
Secondary structure (Cloverleaf model)
>WENV170651192	Met	CAT
                   c      ACCG gcgcggcacg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C A
                    T     C A A C C     A
      C G A        A      | | | | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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