The detailed information of tRNA gene sequence


Sequence ID>WENV170651193
Genome IDJRYF01002225
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 91
End posion on genome 184
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatcgaact
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTCGAATGGGGCCGCCTGCTAAGCGGTTACCGGGGCTTAAACC
TCGGTCGCGGGTTCGAATCCCGTCCTCCCCGCCA
Downstream region at tRNA end position 
cgaaaaacac
Secondary structure (Cloverleaf model)
>WENV170651193	Ser	GCT
                   t      GCCA cgaaaaacac
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       G A C C       G C G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TACCGGGGCTTAAACCTCGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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