The detailed information of tRNA gene sequence


Sequence ID>WENV170651196
Genome IDJRYF01002379
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 8109
End posion on genome 8019
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctttttttt
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTGTACGCCAAAAGCGT
ACCGAGGGTTCGAATCCCTCACTCTCCGCAA
Downstream region at tRNA end position 
acctcatcca
Secondary structure (Cloverleaf model)
>WENV170651196	Ser	GGA
                   t      GCAA acctcatcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACGCCAAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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