The detailed information of tRNA gene sequence


Sequence ID>WENV170651197
Genome IDJRYF01002388
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 996
End posion on genome 1071
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cttctcttcc
tRNA gene sequence 
GCTCCCTTCGTCTAGTGGCCCAGGACACCGCCCTCTCACGGCGGGAACAGGGGTTCGAAA
CCCCTAGGGAGCGCCA
Downstream region at tRNA end position 
atttacatgc
Secondary structure (Cloverleaf model)
>WENV170651197	Glu	CTC
                   c      GCCA atttacatgc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          A A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     GAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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