The detailed information of tRNA gene sequence


Sequence ID>WENV170651198
Genome IDJRYF01002401
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 12972
End posion on genome 13060
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatcgggag
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGCGTGTATACTCCAAAAGGGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCag
Downstream region at tRNA end position 
taacatggtt
Secondary structure (Cloverleaf model)
>WENV170651198	Ser	GGA
                   g      GCag taacatggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACTCCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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