The detailed information of tRNA gene sequence


Sequence ID>WENV170651201
Genome IDJRYF01002496
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2613
End posion on genome 2538
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ggcacggtac
tRNA gene sequence 
GGGCTCTTAGCTCAGCTGGTAGAGCAGCGGACTCTTAATCCGTTGGTCGCAGGTTCGAAT
CCTGCAGGGCCCACCA
Downstream region at tRNA end position 
gaacacccga
Secondary structure (Cloverleaf model)
>WENV170651201	Lys	CTT
                   c      ACCA gaacacccga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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