The detailed information of tRNA gene sequence


Sequence ID>WENV170651203
Genome IDJRYF01002507
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2555
End posion on genome 2481
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgataaaac
tRNA gene sequence 
GGCGCAGTAGCTCAGCTGGTCAGAGCGTGTGATTCATAATCACAAGGTCGGCGGTTCAAG
CCCGCCCTGCGCTACat
Downstream region at tRNA end position 
cccaagcctg
Secondary structure (Cloverleaf model)
>WENV170651203	Met	CAT
                   c      ACat cccaagcctg
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     C C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T - A
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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