The detailed information of tRNA gene sequence


Sequence ID>WENV170651205
Genome IDJRYF01002570
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1193
End posion on genome 1119
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttcgcacgt
tRNA gene sequence 
AGGGGCGTGGTGTCAACGGCAGCACAGCGGTCTCCAAAACCGTTAGAGGGGGTTCGAATC
CCTCCGCCCCTGCCA
Downstream region at tRNA end position 
ctaggcaaca
Secondary structure (Cloverleaf model)
>WENV170651205	Trp	CCA
                   t      GCCA ctaggcaaca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A A C        G      | + | | |     G
    C       T G T G       G G G G G     C
    G       + | | |                 T T
    G       G C A C
      C A          A     TAGA
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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