The detailed information of tRNA gene sequence


Sequence ID>WENV170651211
Genome IDJRYF01002665
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1202
End posion on genome 1107
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aggtttctgc
tRNA gene sequence 
GGAGGGGAAACGATCCTGGTGGGTCGGCCGGGCTTCAAACCCGGTGGGTGGCGCCATGCG
TCGCTGGGTGGGTTCGACTCCCATTCCCCTCCGCCA
Downstream region at tRNA end position 
cgacacatcc
Secondary structure (Cloverleaf model)
>WENV170651211	SeC	TCA
                   c      GCCA cgacacatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    A     T A C C C     A
      T C C        A      + | | | |     G
    G       T A G C       G T G G G     C
    G       + | | |                 T T
    T       G T C G
      G G          G     TGGGTGGCGCCATGCGTCGCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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