The detailed information of tRNA gene sequence


Sequence ID>WENV170651215
Genome IDJRYF01002741
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 5305
End posion on genome 5229
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgaagcgctt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCAACTGCTTTGGGAGCAGTGGGTCGCACGTTCGAA
TCGTGTCACCCCGACCA
Downstream region at tRNA end position 
ataaaatcaa
Secondary structure (Cloverleaf model)
>WENV170651215	Pro	TGG
                   t      ACCA ataaaatcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T G C     A
      C G A        A      + | | | |     G
    C       C G C G       G C A C G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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