The detailed information of tRNA gene sequence


Sequence ID>WENV170651220
Genome IDJRYF01002956
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4721
End posion on genome 4648
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttcaatagac
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCCAGGACGGAGCCCTCTCAAGGCTCAAACAGGGGTTCGAGT
CCCCTTGGGGGCACtc
Downstream region at tRNA end position 
ttctaaaggg
Secondary structure (Cloverleaf model)
>WENV170651220	Glu	CTC
                   c      ACtc ttctaaaggg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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