The detailed information of tRNA gene sequence


Sequence ID>WENV170651223
Genome IDJRYF01003242
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1398
End posion on genome 1322
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaccgagcgc
tRNA gene sequence 
GGGTCTGTAGCTCAGGCGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAG
TCCACCCAGACCCACCA
Downstream region at tRNA end position 
gcgtggggcc
Secondary structure (Cloverleaf model)
>WENV170651223	Ile	GAT
                   c      ACCA gcgtggggcc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C C A C C     A
      G G A        A      | | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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