The detailed information of tRNA gene sequence


Sequence ID>WENV170651224
Genome IDJRYF01003242
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1318
End posion on genome 1242
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccaccagcgT
tRNA gene sequence 
GGGGCCATAGCTCAGCCGGGAGAGCGCCGGCTTTGCAAGCCGGGGGTCGGCGGTTCGAAC
CCGCCTGGCTCCACCC
Downstream region at tRNA end position 
ccccccgttc
Secondary structure (Cloverleaf model)
>WENV170651224	Ala	TGC
                   T      ACCC ccccccgttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C A
                    T     C C G C C     A
      C G A        A      | | | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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