The detailed information of tRNA gene sequence


Sequence ID>WENV170651226
Genome IDJRYF01003352
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 20692
End posion on genome 20765
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatacat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAGT
CCAGCCCCCGCTACtc
Downstream region at tRNA end position 
aaatcaagcc
Secondary structure (Cloverleaf model)
>WENV170651226	Met	CAT
                   t      ACtc aaatcaagcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G A C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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