The detailed information of tRNA gene sequence


Sequence ID>WENV170651235
Genome IDJRYF01003612
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 10642
End posion on genome 10567
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gatcattatc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTCAGAGCACCTGCCTTACAAGCAGGGGGTCACTGGTTCGA
GTCCAGTATCGCCCACtt
Downstream region at tRNA end position 
tccaaaataa
Secondary structure (Cloverleaf model)
>WENV170651235	Val	TAC
                   c      ACtt tccaaaataa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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