The detailed information of tRNA gene sequence


Sequence ID>WENV170651236
Genome IDJRYF01003622
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 48773
End posion on genome 48847
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agtaattatt
tRNA gene sequence 
GGCCCTATCGTCTATCGGCTAGGACACTTGGTTCTCATCCAAGAAAGCGGAGTTCGATTC
TCCGTAGGGTCACGA
Downstream region at tRNA end position 
gtacaaaaat
Secondary structure (Cloverleaf model)
>WENV170651236	Glu	CTC
                   t      ACGA gtacaaaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T T
                    T     G C C T C     A
      C T A        C      | | | | |     G
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    C       G G A C
      T A          A     AAAG
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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