The detailed information of tRNA gene sequence


Sequence ID>WENV170651268
Genome IDJRYF01004485
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 551
End posion on genome 638
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccaccaacat
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTTAATGGGACTGCCTCGAAAGCAGATCGCTGGAAACGGCGC
GCGAGTTCGAATCTCGCCCTCTCCTCCA
Downstream region at tRNA end position 
gataaataag
Secondary structure (Cloverleaf model)
>WENV170651268	Ser	CGA
                   t      TCCA gataaataag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G C G A G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TCGCTGGAAACGGCGC
                    A   A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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