The detailed information of tRNA gene sequence


Sequence ID>WENV170651270
Genome IDJRYF01004486
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2579
End posion on genome 2665
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actttagaat
tRNA gene sequence 
GGAGGAGTGGCAGAGCGGCTAATCGCACCATCTTGGAAAGGTGGCGCTCGAAAGGGCACG
TGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ggctgaagtg
Secondary structure (Cloverleaf model)
>WENV170651270	Ser	GGA
                   t      GCCA ggctgaagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       +   | |                 T T
    C       T C G C
      T A A        A     CGCTCGAAAGGGCAC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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