The detailed information of tRNA gene sequence


Sequence ID>WENV170651288
Genome IDJRYF01005385
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4849
End posion on genome 4925
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgcagttca
tRNA gene sequence 
GGCGCTTTAGCTCAGTCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCGAG
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
gaacctggaa
Secondary structure (Cloverleaf model)
>WENV170651288	Met	CAT
                   a      ACCA gaacctggaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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