The detailed information of tRNA gene sequence


Sequence ID>WENV170651291
Genome IDJRYF01005576
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3708
End posion on genome 3781
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ataaagcgat
tRNA gene sequence 
GCCCTGGTAGCTCAATGGACAGAGCAACGGCCTTCTAAGCCGCAGGTTGCAGGTTCGAAT
CCTGTCCGGGGCGCtt
Downstream region at tRNA end position 
ctttgtttaa
Secondary structure (Cloverleaf model)
>WENV170651291	Arg	TCT
                   t      GCtt ctttgtttaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T A A        A      + | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     AGGTT
                    A   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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