The detailed information of tRNA gene sequence


Sequence ID>WENV170651294
Genome IDJRYF01005616
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2809
End posion on genome 2735
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caactcccat
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTAGCGCGCGTCGTTCGGGACGACGAGGTCGGAGGTTCGAA
TCCTCTCACCCCGACac
Downstream region at tRNA end position 
aatttctttc
Secondary structure (Cloverleaf model)
>WENV170651294	Pro	CGG
                   t      ACac aatttctttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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