The detailed information of tRNA gene sequence


Sequence ID>WENV170651295
Genome IDJRYF01005631
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 233
End posion on genome 156
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aagcctaacc
tRNA gene sequence 
GGGTGGTTAGCTCAGTTGGTTTAGAGCGCTGCTTTGACAGAGCAGAGGTCACTGGTTCGA
ATCCAGTACTACCCACGA
Downstream region at tRNA end position 
gggggagtta
Secondary structure (Cloverleaf model)
>WENV170651295	Val	GAC
                   c      ACGA gggggagtta
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     G - C
                     T - A          T A
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    T - A
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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