The detailed information of tRNA gene sequence


Sequence ID>WENV170651297
Genome IDJRYF01005804
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2860
End posion on genome 2934
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgccgccgcg
tRNA gene sequence 
GGGTGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGCCACAGGTTCGATCC
CTGTACCACCCACCA
Downstream region at tRNA end position 
tccgtttgcc
Secondary structure (Cloverleaf model)
>WENV170651297	Val	CAC
                   g      ACCA tccgtttgcc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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