The detailed information of tRNA gene sequence


Sequence ID>WENV170651298
Genome IDJRYF01005918
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2799
End posion on genome 2723
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcttctcaga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
aatttcaagg
Secondary structure (Cloverleaf model)
>WENV170651298	Met	CAT
                   a      ACCA aatttcaagg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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