The detailed information of tRNA gene sequence


Sequence ID>WENV170651300
Genome IDJRYF01005966
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 208
End posion on genome 284
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgacgtga
tRNA gene sequence 
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAA
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
cacaaggggg
Secondary structure (Cloverleaf model)
>WENV170651300	Ile	GAT
                   a      ACCA cacaaggggg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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