The detailed information of tRNA gene sequence


Sequence ID>WENV170651305
Genome IDJRYF01006069
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2328
End posion on genome 2253
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccaccacat
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCGACT
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
gattaggtca
Secondary structure (Cloverleaf model)
>WENV170651305	Ala	TGC
                   t      ACCA gattaggtca
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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