The detailed information of tRNA gene sequence


Sequence ID>WENV170651310
Genome IDJRYF01006186
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 5774
End posion on genome 5698
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcgggctctc
tRNA gene sequence 
AGGCGCGTAGCTCAGCTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGGGGGTTCGAG
TCCCTCCGCGCCTACCA
Downstream region at tRNA end position 
gaatcggtag
Secondary structure (Cloverleaf model)
>WENV170651310	Val	GAC
                   c      ACCA gaatcggtag
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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