The detailed information of tRNA gene sequence


Sequence ID>WENV170651321
Genome IDJRYF01006721
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 127
End posion on genome 216
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acagcgtgtt
tRNA gene sequence 
GGAGAGATGACCGAGTGGTCGAAGGTGCCGTTCTCGAAAAGCGGTGTTCCGTTTACGGAA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170651321	Ser	CGA
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    T       A G G T
      C G A        G     TGTTCCGTTTACGGAACC
                    C - G
                    C - G
                    G - C
                    T + G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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