The detailed information of tRNA gene sequence


Sequence ID>WENV170651327
Genome IDJRYF01007105
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 6609
End posion on genome 6534
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggagtcgcgc
tRNA gene sequence 
AGGGGTATAGCTCAACTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
agcatgacca
Secondary structure (Cloverleaf model)
>WENV170651327	Trp	CCA
                   c      GCCA agcatgacca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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