The detailed information of tRNA gene sequence


Sequence ID>WENV170651335
Genome IDJRYF01007153
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 6673
End posion on genome 6762
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttcttaga
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATCGGGACGGTCTCGAAAACCGTTGTACGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
gcagccctgg
Secondary structure (Cloverleaf model)
>WENV170651335	Ser	CGA
                   a      GCAA gcagccctgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGTACGGGCAACCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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