The detailed information of tRNA gene sequence


Sequence ID>WENV170651338
Genome IDJRYF01007296
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 5197
End posion on genome 5281
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
caggtcacct
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGTACTAGCGCTGAGAGGCGTGGA
GGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
gatggatggg
Secondary structure (Cloverleaf model)
>WENV170651338	Leu	CAG
                   t      ACCA gatggatggg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCTGAGAGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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