The detailed information of tRNA gene sequence


Sequence ID>WENV170651339
Genome IDJRYF01007380
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3661
End posion on genome 3587
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccaccgacgc
tRNA gene sequence 
CTCTCCGTAGTTCAATGGATAGAACGGCCGCCTCCTAAGCGGCAAATACAGGTTCGATTC
CTGTCGGAGGGACCA
Downstream region at tRNA end position 
ccctcgccgc
Secondary structure (Cloverleaf model)
>WENV170651339	Arg	CCT
                   c      ACCA ccctcgccgc
                     C - G
                     T + G
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AAAT
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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