The detailed information of tRNA gene sequence


Sequence ID>WENV170651341
Genome IDJRYF01007570
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 123
End posion on genome 46
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gacgtcctgT
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCTTCATTCACATTGAAGAGGTCGTGGGTTCGAG
TCCCTCCGCGCCCATCA
Downstream region at tRNA end position 
aattaggtga
Secondary structure (Cloverleaf model)
>WENV170651341	Val	CAC
                   T      ATCA aattaggtga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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