The detailed information of tRNA gene sequence


Sequence ID>WENV170651347
Genome IDJRYF01007992
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 207
End posion on genome 283
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcctgatcct
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCAACTGCTTTGGGAGCAGTGGGTCGCACGTTCGAA
TCGTGTCACCCCGACCA
Downstream region at tRNA end position 
ttcgaggcgc
Secondary structure (Cloverleaf model)
>WENV170651347	Pro	TGG
                   t      ACCA ttcgaggcgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T G C     A
      C G A        G      + | | | |     G
    C       C G C G       G C A C G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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